ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FNP1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9FNP1_F1_nD2

Q9FNP1_F1_nD2

UID: 003821362

AlphaFold

Range: 101-185
AlphaFold: AF-Q9FNP1
UniProt: Q9FNP1 (all domains)
Gene: PEX1

Protein: Peroxisomal ATPase PEX1 (EC 3.6.4.-) (Peroxin-1) (AtPEX1) (Peroxisome biogenesis protein 1)

3D Structure

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Related Domains

Browse other domains in PEX-1N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyPEX-1N(229.1.1.3)

Pfam Families

Peroxisome biogenesis factor 1, N-terminal

ClanCL0402Cdc48_2-like

External Links

AlphaFold DB: Q9FNP1 UniProt: Q9FNP1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-185