ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q500V9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q500V9_F1_nD2

Q500V9_F1_nD2

UID: 003821575

AlphaFold

Range: 126-240
AlphaFold: AF-Q500V9
UniProt: Q500V9 (all domains)
Gene: DPB2

Protein: DNA polymerase epsilon subunit B (DNA polymerase II subunit 2) (AtDPB2) (Protein CYCLOPS 2)

3D Structure

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Related Domains

Browse other domains in OB_POLE2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_POLE2(2.1.1.224)

Pfam Families

PF29084OB_POLE2

DNA polymerase epsilon subunit 2-like, OB-fold domain

ClanCL0021OB

External Links

AlphaFold DB: Q500V9 UniProt: Q500V9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 126-240