ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9LUQ3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LUQ3_F1_nD1

Q9LUQ3_F1_nD1

UID: 003821859

AlphaFold

Range: 16-55
AlphaFold: AF-Q9LUQ3
UniProt: Q9LUQ3 (all domains)
Gene: SDE5

Protein: Putative nuclear RNA export factor SDE5 (Protein SILENCING DEFECTIVE 5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in UBA_At5g58720 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_At5g58720(103.1.1.87)

Pfam Families

PF24767UBA_At5g58720

At5g58720 UBA-like domain

ClanCL0214UBA

External Links

AlphaFold DB: Q9LUQ3 UniProt: Q9LUQ3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-55