ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

F4JXM9_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/F4JXM9_F1_nD7

F4JXM9_F1_nD7

UID: 003823513

AlphaFold

Range: 936-960,1066-1175
AlphaFold: AF-F4JXM9
UniProt: F4JXM9 (all domains)
Gene: ROG2

Protein: Trafficking protein particle complex subunit-like protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Gryzun-like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGryzun-like(11.1.1.542)

Pfam Families

PF12742Gryzun-like

TRAPPC11 C-terminal domain

ClanCL0159E-set

External Links

AlphaFold DB: F4JXM9 UniProt: F4JXM9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 936-960,1066-1175