ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4IJV4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/F4IJV4_F1_nD5

F4IJV4_F1_nD5

UID: 003823896

AlphaFold

Range: 756-955
AlphaFold: AF-F4IJV4
UniProt: F4IJV4 (all domains)
Gene: MEE29

Protein: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 (EC 3.6.4.13) (DEAH RNA helicase homolog PRP2) (Protein MATERNAL EFFECT EMBRYO ARREST 29)

3D Structure

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Related Domains

Browse other domains in HA2_N,HA2_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSec63 N-terminal subdomain-like(4156)

HH-groupSec63 N-terminal subdomain-like(4156.1)

TT-groupSec63 N-terminal subdomain-like(4156.1.1)

FFamilyHA2_N,HA2_C(4156.1.1.2)

Pfam Families

PF04408WHD_HA2

Helicase associated domain (HA2), winged-helix

ClanCL0123HTH

Helicase associated domain (HA2), ratchet-like

External Links

AlphaFold DB: F4IJV4 UniProt: F4IJV4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 756-955