ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9M4A1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9M4A1_F1_nD3

Q9M4A1_F1_nD3

UID: 003823948

AlphaFold

Range: 211-383
AlphaFold: AF-Q9M4A1
UniProt: Q9M4A1 (all domains)
Gene: SPO11-2

Protein: Meiotic recombination protein SPO11-2 (AtSPO11-2) (EC 5.6.2.2)

3D Structure

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Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: Q9M4A1 UniProt: Q9M4A1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-383