ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9C5Y4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9C5Y4_F1_nD2

Q9C5Y4_F1_nD2

UID: 003825615

AlphaFold

Range: 1-435,736-1170
AlphaFold: AF-Q9C5Y4
UniProt: Q9C5Y4 (all domains)
Gene: SMC2-1

Protein: Structural maintenance of chromosomes protein 2-1 (AtSMC2-1) (Chromosome-associated protein E-1) (AtCAP-E1) (Protein TITAN 3)

3D Structure

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Related Domains

Browse other domains in SMC_N, AAA_23 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N, AAA_23(2004.1.1.433)

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q9C5Y4 UniProt: Q9C5Y4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-435,736-1170