ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F4J487_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4J487_F1_nD2

F4J487_F1_nD2

UID: 003826063

AlphaFold

Range: 121-244
AlphaFold: AF-F4J487
UniProt: F4J487 (all domains)
Gene: At3g29750

Protein: Eukaryotic aspartyl protease family protein

3D Structure

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Related Domains

Browse other domains in RVP_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP_2(1.1.1.17)

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

AlphaFold DB: F4J487 UniProt: F4J487

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-244