ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84WS8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q84WS8_F1_nD1

Q84WS8_F1_nD1

UID: 003826840

AlphaFold

Range: 11-140
AlphaFold: AF-Q84WS8
UniProt: Q84WS8 (all domains)
Gene: SNRNP25

Protein: U11/U12 small nuclear ribonucleoprotein 25 kDa protein (U11/U12 snRNP 25 kDa protein) (U11/U12-25K)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_4(221.1.1.59)

Pfam Families

PF18036Ubiquitin_4

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q84WS8 UniProt: Q84WS8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-140