ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q93ZS6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q93ZS6_F1_nD3

Q93ZS6_F1_nD3

UID: 003827194

AlphaFold

Range: 626-670,711-750
AlphaFold: AF-Q93ZS6
UniProt: Q93ZS6 (all domains)
Gene: LRS1

Protein: AT3g05090/T12H1_5 (Transducin/WD40 repeat-like superfamily protein)

3D Structure

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Related Domains

Browse other domains in DUF3337 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyDUF3337(221.1.1.43)

Pfam Families

PF11816Ubl_WDR48-Bun107

WDR48/Bun107, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q93ZS6 UniProt: Q93ZS6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 626-670,711-750