ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JRJ6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F4JRJ6_F1_nD4

F4JRJ6_F1_nD4

UID: 003827220

AlphaFold

Range: 601-675
AlphaFold: AF-F4JRJ6
UniProt: F4JRJ6 (all domains)
Gene: At4g18465

Protein: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 (EC 3.6.4.13) (DEAH RNA helicase homolog DDX35)

3D Structure

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Related Domains

Browse other domains in OB_NTP_bind →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_NTP_bind(2.1.1.37)

Pfam Families

PF07717OB_NTP_bind

Oligonucleotide/oligosaccharide-binding (OB)-fold

ClanCL0021OB

External Links

AlphaFold DB: F4JRJ6 UniProt: F4JRJ6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 601-675