ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LRS3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9LRS3_F1_nD1

Q9LRS3_F1_nD1

UID: 003827367

AlphaFold

Range: 6-180
AlphaFold: AF-Q9LRS3
UniProt: Q9LRS3 (all domains)
Gene: At3g28140

Protein: RNA ligase/cyclic nucleotide phosphodiesterase family protein

3D Structure

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Related Domains

Browse other domains in 2_5_RNA_ligase2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamily2_5_RNA_ligase2(264.1.1.9)

Pfam Families

PF135632_5_RNA_ligase2

2'-5' RNA ligase superfamily

ClanCL02472H

External Links

AlphaFold DB: Q9LRS3 UniProt: Q9LRS3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-180