ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6NLS0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6NLS0_F1_nD2

Q6NLS0_F1_nD2

UID: 003828189

AlphaFold

Range: 101-180
AlphaFold: AF-Q6NLS0
UniProt: Q6NLS0 (all domains)
Gene: At2g29070

Protein: At2g29070 (Ubiquitin fusion degradation UFD1 family protein)

3D Structure

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Related Domains

Browse other domains in UFD1_N2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyUFD1_N2(229.1.1.8)

Pfam Families

PF24842UFD1_N2

Ubiquitin fusion degradation protein UFD1, N-terminal subdomain 2

ClanCL0402Cdc48_2-like

External Links

AlphaFold DB: Q6NLS0 UniProt: Q6NLS0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-180