ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JAA5_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/F4JAA5_F1_nD6

F4JAA5_F1_nD6

UID: 003828954

AlphaFold

Range: 876-920,1076-1140
AlphaFold: AF-F4JAA5
UniProt: F4JAA5 (all domains)
Gene: SKI2

Protein: DExH-box ATP-dependent RNA helicase DExH11 (EC 3.6.4.13) (AtHELPS) (Protein SKI2 homolog) (AtSKI2)

3D Structure

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Related Domains

Browse other domains in MTR4_beta-barrel →

Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamilyMTR4_beta-barrel(3324.1.1.1)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

External Links

AlphaFold DB: F4JAA5 UniProt: F4JAA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 876-920,1076-1140