ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9S775_F1_nD8 - ECOD Domain | ECOD

ECOD/Domains/Q9S775_F1_nD8

Q9S775_F1_nD8

UID: 003829043

AlphaFold

Range: 1006-1105,1161-1195
AlphaFold: AF-Q9S775
UniProt: Q9S775 (all domains)
Gene: PKL

Protein: CHD3-type chromatin-remodeling factor PICKLE (EC 3.6.4.-) (Protein CHROMATIN REMODELING 6) (AtCHR6) (Protein GYMNOS)

3D Structure

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Related Domains

Browse other domains in CHD subfamily II, SANT-like domain / CHDCT2 (NUC038) domain →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyCHD subfamily II, SANT-like domain / CHDCT2 (NUC038) domain(101.1.1.38)

Pfam Families

PF06461CHDII_SANT-like

CHD subfamily II, SANT-like domain

ClanCL0123HTH

CHDCT2 (NUC038) domain

ClanCL0123HTH

External Links

AlphaFold DB: Q9S775 UniProt: Q9S775

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1006-1105,1161-1195