ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4HPZ9_F1_nD8 - ECOD Domain | ECOD

ECOD/Domains/F4HPZ9_F1_nD8

F4HPZ9_F1_nD8

UID: 003829457

AlphaFold

Range: 1241-1385
AlphaFold: AF-F4HPZ9
UniProt: F4HPZ9 (all domains)
Gene: LIG6

Protein: DNA ligase 6 (AtLIG6) (DNA ligase VI) (EC 6.5.1.1) (Ligase 1)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_A_C(2.1.1.31)

Pfam Families

PF04679DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

ClanCL0021OB

External Links

AlphaFold DB: F4HPZ9 UniProt: F4HPZ9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1241-1385