ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4ITM1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F4ITM1_F1_nD4

F4ITM1_F1_nD4

UID: 003829657

AlphaFold

Range: 306-355
AlphaFold: AF-F4ITM1
UniProt: F4ITM1 (all domains)
Gene: RSL1

Protein: E3 ubiquitin-protein ligase RSL1 (EC 2.3.2.31) (Protein RING FINGER OF SEED LONGEVITY 1) (RING-type E3 ubiquitin transferase RSL1)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupAriadne-1 protein homolog(376.1.4)

FFamilyIBR(376.1.4.1)

Pfam Families

IBR domain, a half RING-finger domain

ClanCL0229RING

External Links

AlphaFold DB: F4ITM1 UniProt: F4ITM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-355