ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9LQV2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9LQV2_F1_nD3

Q9LQV2_F1_nD3

UID: 003829878

AlphaFold

Range: 256-505
AlphaFold: AF-Q9LQV2
UniProt: Q9LQV2 (all domains)
Gene: RDR1

Protein: RNA-dependent RNA polymerase 1 (AtRDRP1) (EC 2.7.7.48) (RNA-directed RNA polymerase 1)

3D Structure

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Related Domains

Browse other domains in RdRP_helical →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938)

HH-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1)

TT-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1.1)

FFamilyRdRP_helical(3938.1.1.3)

Pfam Families

PF26252RdRP_helical

RNA dependent RNA polymerase, helical domain

External Links

AlphaFold DB: Q9LQV2 UniProt: Q9LQV2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 256-505