ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F4J1H2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4J1H2_F1_nD2

F4J1H2_F1_nD2

UID: 003829916

AlphaFold

Range: 176-204,261-445
AlphaFold: AF-F4J1H2
UniProt: F4J1H2 (all domains)
Gene: At3g16230

Protein: Eukaryotic LigT

3D Structure

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Related Domains

Browse other domains in AKAP7_NLS →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyAKAP7_NLS(264.1.1.7)

Pfam Families

PF10469AKAP7_NLS

AKAP7 2'5' RNA ligase-like domain

ClanCL02472H

External Links

AlphaFold DB: F4J1H2 UniProt: F4J1H2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-204,261-445