ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JGZ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4JGZ1_F1_nD1

F4JGZ1_F1_nD1

UID: 003829960

AlphaFold

Range: 81-235,271-350,381-539,566-735,1071-1080
AlphaFold: AF-F4JGZ1
UniProt: F4JGZ1 (all domains)
Gene: MED16

Protein: Mediator of RNA polymerase II transcription subunit 16 (Protein SENSITIVE TO FREEZING 6)

3D Structure

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Related Domains

Browse other domains in MED16_beta-prop →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyMED16_beta-prop(5.1.4.508)

Pfam Families

PF30952MED16_beta-prop

Mediator complex subunit 16 N-terminal domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: F4JGZ1 UniProt: F4JGZ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-235,271-350,381-539,566-735,1071-1080