ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8H1F9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8H1F9_F1_nD1

Q8H1F9_F1_nD1

UID: 003830074

AlphaFold

Range: 51-135
AlphaFold: AF-Q8H1F9
UniProt: Q8H1F9 (all domains)
Gene: PCH2

Protein: Pachytene checkpoint protein 2 homolog (AtPCH2)

3D Structure

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Related Domains

Browse other domains in TRIP13_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyTRIP13_N(229.1.1.7)

Pfam Families

PF23563TRIP13_N

TRIP13 N-terminal domain

ClanCL0402Cdc48_2-like

External Links

AlphaFold DB: Q8H1F9 UniProt: Q8H1F9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-135