ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A9LNK9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A9LNK9_F1_nD4

A9LNK9_F1_nD4

UID: 003830469

AlphaFold

Range: 223-395
AlphaFold: AF-A9LNK9
UniProt: A9LNK9 (all domains)
Gene: CPSF30

Protein: 30-kDa cleavage and polyadenylation specificity factor 30 (EC 3.1.21.-) (Protein OXIDATIVE STRESS TOLERANT 6) (Zinc finger CCCH domain-containing protein 11) (AtC3H11)

3D Structure

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Related Domains

Browse other domains in YTH →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyYTH(1.1.9.8)

Pfam Families

YT521-B-like domain

ClanCL0178PUA

External Links

AlphaFold DB: A9LNK9 UniProt: A9LNK9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 223-395