ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6Q1P4_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q6Q1P4_F1_nD5

Q6Q1P4_F1_nD5

UID: 003830738

AlphaFold

Range: 6-205,1006-1215
AlphaFold: AF-Q6Q1P4
UniProt: Q6Q1P4 (all domains)
Gene: SMC1

Protein: Structural maintenance of chromosomes protein 1 (SMC protein 1) (SMC-1) (Chromosome segregation protein SMC-1) (Cohesin complex subunit SMC-1) (Protein TITAN8)

3D Structure

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Related Domains

Browse other domains in SMC_N, AAA_21, AAA_29 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N, AAA_21, AAA_29(2004.1.1.480)

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

AAA domain, putative AbiEii toxin, Type IV TA system

ClanCL0023P-loop_NTPase

P-loop containing region of AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q6Q1P4 UniProt: Q6Q1P4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-205,1006-1215