ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A8MS85_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A8MS85_F1_nD4

A8MS85_F1_nD4

UID: 003831053

AlphaFold

Range: 701-885
AlphaFold: AF-A8MS85
UniProt: A8MS85 (all domains)
Gene: SPT6

Protein: Transcription elongation factor SPT6 homolog (AtSPT6)

3D Structure

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Related Domains

Browse other domains in YqgF →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyYqgF(2484.1.1.72)

Pfam Families

Holliday-junction resolvase-like of SPT6

ClanCL0580YqgF

External Links

AlphaFold DB: A8MS85 UniProt: A8MS85

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 701-885