ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8VZI6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8VZI6_F1_nD3

Q8VZI6_F1_nD3

UID: 003831158

AlphaFold

Range: 211-325
AlphaFold: AF-Q8VZI6
UniProt: Q8VZI6 (all domains)
Gene: At4g33380

Protein: AT4g33380/F17M5_140 (Dimethylallyl, adenosine tRNA methylthiotransferase)

3D Structure

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Related Domains

Browse other domains in PAN_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHairpin loop containing domain-like(390)

HH-groupHairpin loop containing domain-like(390.1)

TT-groupHairpin loop containing domain-like(390.1.1)

FFamilyPAN_4(390.1.1.8)

Pfam Families

PAN domain

ClanCL0168PAN

External Links

AlphaFold DB: Q8VZI6 UniProt: Q8VZI6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-325