ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9MAT3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9MAT3_F1_nD1

Q9MAT3_F1_nD1

UID: 003831348

AlphaFold

Range: 1-40
AlphaFold: AF-Q9MAT3
UniProt: Q9MAT3 (all domains)
Gene: At1g04850

Protein: F13M7.16 protein (Ubiquitin-associated (UBA)/TS-N domain-containing protein)

3D Structure

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Related Domains

Browse other domains in zf-C2H2_OTU1_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2_OTU1_C(386.1.1.131)

Pfam Families

PF24560zf-C2H2_OTU1_C

Ubiquitin thioesterase OTU1, C-terminal C2H2-type zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: Q9MAT3 UniProt: Q9MAT3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-40