ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JRX3_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/F4JRX3_F1_nD6

F4JRX3_F1_nD6

UID: 003831478

AlphaFold

Range: 1141-1200
AlphaFold: AF-F4JRX3
UniProt: F4JRX3 (all domains)
Gene: At4g31210

Protein: DNA topoisomerase (EC 5.6.2.1)

3D Structure

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Related Domains

Browse other domains in Toprim_C_rpt →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13)

TT-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13.1)

FFamilyToprim_C_rpt(375.13.1.1)

Pfam Families

PF13368Toprim_C_rpt

Topoisomerase C-terminal repeat

External Links

AlphaFold DB: F4JRX3 UniProt: F4JRX3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1141-1200