ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4HUW0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4HUW0_F1_nD2

F4HUW0_F1_nD2

UID: 003831735

AlphaFold

Range: 241-413,441-490,521-540
AlphaFold: AF-F4HUW0
UniProt: F4HUW0 (all domains)
Gene: At1g28090

Protein: Polynucleotide adenylyltransferase family protein

3D Structure

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Related Domains

Browse other domains in PolyA_pol_RNAbd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupPoly A polymerase C-terminal region-like(131.2)

TT-groupPoly A polymerase C-terminal region-like(131.2.1)

FFamilyPolyA_pol_RNAbd(131.2.1.3)

Pfam Families

PF12627PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

External Links

AlphaFold DB: F4HUW0 UniProt: F4HUW0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 241-413,441-490,521-540