ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9FPW4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9FPW4_F1_nD1

Q9FPW4_F1_nD1

UID: 003831890

AlphaFold

Range: 466-610
AlphaFold: AF-Q9FPW4
UniProt: Q9FPW4 (all domains)
Gene: VIP2

Protein: Probable NOT transcription complex subunit VIP2 (Protein VIRE2 INTERACTING PROTEIN2) (AtVIP2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NOT2_3_5_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyNOT2_3_5_C(4.1.1.41)

Pfam Families

PF04153NOT2_3_5_C

NOT2/NOT3/NOT5 C-terminal

ClanCL0010SH3

External Links

AlphaFold DB: Q9FPW4 UniProt: Q9FPW4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-610