ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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F4J6V5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/F4J6V5_F1_nD2

F4J6V5_F1_nD2

UID: 003831923

AlphaFold

Range: 201-265
AlphaFold: AF-F4J6V5
UniProt: F4J6V5 (all domains)
Gene: At3g52270

Protein: Transcription initiation factor IIF, beta subunit

3D Structure

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Related Domains

Browse other domains in TFIIF_beta →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTFIIF_beta(101.1.2.35)

Pfam Families

PF02270TFIIF_beta

TFIIF, beta subunit HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: F4J6V5 UniProt: F4J6V5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 201-265