ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JP48_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/F4JP48_F1_nD3

F4JP48_F1_nD3

UID: 003832255

AlphaFold

Range: 506-750
AlphaFold: AF-F4JP48
UniProt: F4JP48 (all domains)
Gene: MSH4

Protein: DNA mismatch repair protein MSH4 (AtMSH4) (MutS protein homolog 4)

3D Structure

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Related Domains

Browse other domains in MutS_V →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMutS_V(2004.1.1.45)

Pfam Families

MutS domain V

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F4JP48 UniProt: F4JP48

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 506-750