ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O82188_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/O82188_F1_nD5

O82188_F1_nD5

UID: 003832554

AlphaFold

Range: 501-595,706-975
AlphaFold: AF-O82188
UniProt: O82188 (all domains)
Gene: RDR5

Protein: Probable RNA-dependent RNA polymerase 5 (AtRDRP5) (EC 2.7.7.48) (RNA-directed RNA polymerase 5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RdRP, RdRP_head →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP, RdRP_head(3588.1.1.2)

Pfam Families

RNA dependent RNA polymerase

PF26253RdRP_head

RdRP, head domain

External Links

AlphaFold DB: O82188 UniProt: O82188

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 501-595,706-975