ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O82188_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/O82188_F1_nD3

O82188_F1_nD3

UID: 003832555

AlphaFold

Range: 361-500
AlphaFold: AF-O82188
UniProt: O82188 (all domains)
Gene: RDR5

Protein: Probable RNA-dependent RNA polymerase 5 (AtRDRP5) (EC 2.7.7.48) (RNA-directed RNA polymerase 5)

3D Structure

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Related Domains

Browse other domains in RdRP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRdRP(1.1.2.11)

Pfam Families

RNA dependent RNA polymerase

External Links

AlphaFold DB: O82188 UniProt: O82188

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-500