ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9C811_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9C811_F1_nD3

Q9C811_F1_nD3

UID: 003832770

AlphaFold

Range: 846-1190,1211-1245
AlphaFold: AF-Q9C811
UniProt: Q9C811 (all domains)
Gene: NUP160

Protein: Nuclear pore complex protein NUP160 (AtNUP160) (Nucleoporin 160) (Protein SUPPRESSOR OF AUXIN RESISTANCE 1)

3D Structure

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Related Domains

Browse other domains in TPR_NUP160_120_M →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyTPR_NUP160_120_M(109.26.1.6)

Pfam Families

PF23354TPR_NUP160_120_M

NUP160/120 middle TPR

ClanCL0020TPR

External Links

AlphaFold DB: Q9C811 UniProt: Q9C811

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 846-1190,1211-1245