ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4IJV4_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/F4IJV4_F1_nD4

F4IJV4_F1_nD4

UID: 003832906

AlphaFold

Range: 166-190,351-375,396-755
AlphaFold: AF-F4IJV4
UniProt: F4IJV4 (all domains)
Gene: MEE29

Protein: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 (EC 3.6.4.13) (DEAH RNA helicase homolog PRP2) (Protein MATERNAL EFFECT EMBRYO ARREST 29)

3D Structure

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Related Domains

Browse other domains in Helicase_C, AAA_22 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C, AAA_22(2004.1.1.697)

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: F4IJV4 UniProt: F4IJV4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-190,351-375,396-755