ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3g5iB1 - ECOD Domain | ECOD

ECOD/Domains/e3g5iB1

e3g5iB1

UID: 000383305

PDB

Range: B:1-311
PDB: 3G5I chain B(all domains)
UniProt: P41409 (all domains)
Gene: rihA

Molecule: Pyrimidine-specific ribonucleoside hydrolase rihA

3D Structure

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Related Domains

Browse other domains in IU_nuc_hydro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleoside hydrolase(7517)

HH-groupNucleoside hydrolase(7517.1)

TT-groupNucleoside hydrolase(7517.1.1)

FFamilyIU_nuc_hydro(7517.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(2S,3S,4R,5R)-2-(3,4-diaminophenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diolDNB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01156IU_nuc_hydro

Inosine-uridine preferring nucleoside hydrolase

ClanCL0727Nucleosidase

External Links

ECOD PDB View: 3G5I RCSB PDB: 3G5I PDBe: 3G5I UniProt: P41409

Downloads

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