ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9ASU6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9ASU6_F1_nD3

Q9ASU6_F1_nD3

UID: 003833725

AlphaFold

Range: 501-540,591-700,781-790
AlphaFold: AF-Q9ASU6
UniProt: Q9ASU6 (all domains)
Gene: At1g42440

Protein: At1g42440/F7F22_7 (Pre-rRNA-processing TSR1-like protein)

3D Structure

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Related Domains

Browse other domains in RIBIOP_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilyRIBIOP_C(1.1.8.2)

Pfam Families

PF04950RIBIOP_C

40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

ClanCL0866ALR_C-like

External Links

AlphaFold DB: Q9ASU6 UniProt: Q9ASU6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 501-540,591-700,781-790