ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9SHE7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9SHE7_F1_nD1

Q9SHE7_F1_nD1

UID: 003834772

AlphaFold

Range: 1-70
AlphaFold: AF-Q9SHE7
UniProt: Q9SHE7 (all domains)
Gene: RUB1

Protein: Ubiquitin-NEDD8-like protein RUB1 [Cleaved into: Ubiquitin; NEDD8-like protein RUB1 (Ubiquitin-related protein 1) (AtRUB1)]

3D Structure

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Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q9SHE7 UniProt: Q9SHE7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-70