ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P54609_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P54609_F1_nD1

P54609_F1_nD1

UID: 003834817

AlphaFold

Range: 16-110
AlphaFold: AF-P54609
UniProt: P54609 (all domains)
Gene: CDC48A

Protein: Cell division control protein 48 homolog A (AtCDC48a)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CDC48_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyCDC48_N(1.1.2.7)

Pfam Families

PF02359CDC48_N

Cell division protein 48 (CDC48), N-terminal domain

ClanCL0199DPBB

External Links

AlphaFold DB: P54609 UniProt: P54609

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-110