ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q94AM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q94AM1_F1_nD1

Q94AM1_F1_nD1

UID: 003834896

AlphaFold

Range: 96-785
AlphaFold: AF-Q94AM1
UniProt: Q94AM1 (all domains)
Gene: OOP

Protein: Organellar oligopeptidase A, chloroplastic/mitochondrial (AtOOP) (EC 3.4.24.70) (Thimet metalloendopeptidase 1) (Zincin-like metalloproteases family protein 1)

3D Structure

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Related Domains

Browse other domains in Peptidase_M3,TOP_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M3,TOP_N(2498.1.1.8)

Pfam Families

PF01432Peptidase_M3

Peptidase family M3

ClanCL0126Peptidase_MA

Neurolysin/Thimet oligopeptidase, N-terminal domain

External Links

AlphaFold DB: Q94AM1 UniProt: Q94AM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-785