ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q39249_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q39249_F1_nD1

Q39249_F1_nD1

UID: 003834982

RepresentativeAlphaFold

Range: 116-190
AlphaFold: AF-Q39249
UniProt: Q39249 (all domains)
Gene: VDE1

Protein: Violaxanthin de-epoxidase, chloroplastic (AtVxDE) (EC 1.23.5.1) (Protein NON-PHOTOCHEMICAL QUENCHING 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in VDE →

Classification

AArchitecturealpha arrays(a.6)

XX-groupDP domain(3444)

HH-groupDP domain(3444.1)

TT-groupDP domain(3444.1.1)

FFamilyVDE(3444.1.1.6)

Pfam Families

VDE lipocalin domain

ClanCL0116Calycin

External Links

AlphaFold DB: Q39249 UniProt: Q39249

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-190