ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O23254_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O23254_F1_nD1

O23254_F1_nD1

UID: 003835180

AlphaFold

Range: 6-465
AlphaFold: AF-O23254
UniProt: O23254 (all domains)
Gene: SHM4

Protein: Serine hydroxymethyltransferase 4 (AtSHMT4) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 4) (Serine methylase 4)

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

AlphaFold DB: O23254 UniProt: O23254

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-465