ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O82504_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O82504_F1_nD2

O82504_F1_nD2

UID: 003835360

AlphaFold

Range: 96-195,221-270
AlphaFold: AF-O82504
UniProt: O82504 (all domains)
Gene: RDR2

Protein: RNA-dependent RNA polymerase 2 (AtRDRP2) (EC 2.7.7.48) (Protein SILENCING MOVEMENT DEFICIENT 1) (RNA-directed RNA polymerase 2)

3D Structure

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Related Domains

Browse other domains in PH_RDR2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyPH_RDR2(220.1.1.183)

Pfam Families

PF24823PH_RDR2

RDR2 PH-like domain

ClanCL0266PH

External Links

AlphaFold DB: O82504 UniProt: O82504

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-195,221-270