ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5XEN2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5XEN2_F1_nD1

Q5XEN2_F1_nD1

UID: 003835929

AlphaFold

Range: 51-135
AlphaFold: AF-Q5XEN2
UniProt: Q5XEN2 (all domains)
Gene: At1g80060

Protein: At1g80060 (Ubiquitin-like superfamily protein)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_4(221.1.1.59)

Pfam Families

PF18036Ubiquitin_4

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q5XEN2 UniProt: Q5XEN2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-135