ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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F4JXF1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/F4JXF1_F1_nD1

F4JXF1_F1_nD1

UID: 003836739

AlphaFold

Range: 1-270
AlphaFold: AF-F4JXF1
UniProt: F4JXF1 (all domains)
Gene: GAF1

Protein: Protein GAMETOPHYTE DEFECTIVE 1 (Probable ribonuclease P protein subunit p30) (AtRPP30) (RNaseP protein p30) (EC 3.1.26.-)

3D Structure

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Related Domains

Browse other domains in RNase_P_p30 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRNase_P_p30(2002.1.1.77)

Pfam Families

PF01876RNase_P_p30

RNase P subunit p30

ClanCL0036TIM_barrel

External Links

AlphaFold DB: F4JXF1 UniProt: F4JXF1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-270