ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FMR6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9FMR6_F1_nD4

Q9FMR6_F1_nD4

UID: 003836891

AlphaFold

Range: 176-235
AlphaFold: AF-Q9FMR6
UniProt: Q9FMR6 (all domains)
Gene: At5g22355

Protein: Cysteine/Histidine-rich C1 domain family protein (Ta11-like non-LTR retroelement protein-like)

3D Structure

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Related Domains

Browse other domains in C1_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_2(376.1.2.2)

Pfam Families

C1 domain

ClanCL0229RING

External Links

AlphaFold DB: Q9FMR6 UniProt: Q9FMR6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-235