ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O82188_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O82188_F1_nD1

O82188_F1_nD1

UID: 003837290

AlphaFold

Range: 11-75
AlphaFold: AF-O82188
UniProt: O82188 (all domains)
Gene: RDR5

Protein: Probable RNA-dependent RNA polymerase 5 (AtRDRP5) (EC 2.7.7.48) (RNA-directed RNA polymerase 5)

3D Structure

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Related Domains

Browse other domains in 4HB_RdRP3_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938)

HH-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1)

TT-groupHeterogeneous nuclear ribonucleoprotein Q acidic domain(3938.1.1)

FFamily4HB_RdRP3_N(3938.1.1.2)

Pfam Families

PF262494HB_RdRP3_N

RdRP3/4/5, N-terminal four helical bundle domain

External Links

AlphaFold DB: O82188 UniProt: O82188

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-75