ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FXD8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9FXD8_F1_nD1

Q9FXD8_F1_nD1

UID: 003837335

AlphaFold

Range: 58-405
AlphaFold: AF-Q9FXD8
UniProt: Q9FXD8 (all domains)
Gene: At1g67750

Protein: Probable pectate lyase 5 (EC 4.2.2.2)

3D Structure

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Related Domains

Browse other domains in Pectate_lyase_4 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase_4(207.2.1.3)

Pfam Families

PF00544Pectate_lyase_4

Pectate lyase

ClanCL0268Pec_lyase-like

External Links

AlphaFold DB: Q9FXD8 UniProt: Q9FXD8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 58-405