ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P56005_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P56005_F1_nD3

P56005_F1_nD3

UID: 003838335

AlphaFold

Range: 291-425
AlphaFold: AF-P56005
UniProt: P56005 (all domains)
Gene: ffh

Protein: Signal recognition particle protein (EC 3.6.5.4) (Fifty-four homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP_SPB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySRP_SPB(101.1.1.19)

Pfam Families

PF02978SRP_SPB

Signal peptide binding domain

ClanCL0123HTH

External Links

AlphaFold DB: P56005 UniProt: P56005

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-425