ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O25173_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O25173_F1_nD1

O25173_F1_nD1

UID: 003839008

AlphaFold

Range: 6-260
AlphaFold: AF-O25173
UniProt: O25173 (all domains)
Gene: cmoB

Protein: tRNA U34 carboxymethyltransferase (EC 2.5.1.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_9(2003.1.5.64)

Pfam Families

PF08003Methyltransf_9

Protein of unknown function (DUF1698)

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: O25173 UniProt: O25173

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-260